Journal of Proteomics & Bioinformatics
Open Access

Poorichaya Somparn

Publications

• Review Article
  Integrated Design of Antibodies for Systems Biology Using Ab Designer
  Author(s): Trairak Pisitkun, Patrick Dummer, Poorichaya Somparn, Nattiya Hirankarn, Jeffrey B Kopp and Mark A Knepper Trairak Pisitkun, Patrick Dummer, Poorichaya Somparn, Nattiya Hirankarn, Jeffrey B Kopp and Mark A Knepper
  
  In the current era of large-scale biology, systems biology has evolved as a powerful approach to identify complex interactions within biological systems. In addition to high throughput identification and quantification techniques, methods based on high-quality mono-specific antibodies remain an essential element of the approach. To assist the large-scale design and production of peptide-directed antibodies for systems biology studies, we developed a fully integrated online application, Ab Designer (http://helixweb.nih.gov/AbDesigner/), to help researchers select optimal peptide immunogens for antibody generation against relatively disordered regions of target proteins. Here we describe Ab Designer in terms of its features, comparing it to other software tools, and use it to design three antibodies against kidney disease-related proteins in human, viz. nephrin, podocin, and apolipoprot.. View More»
  DOI: 10.4172/jpb.1000307

  Abstract PDF

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