ISSN: 2161-0517
Biochemistry Data Analyst, GDS Applied Mathematics BV, Den Haag, Netherlands
Han Geurdes work for Biochemistry Data Analyst, GDS Applied Mathematics BV, Den Haag, Netherlands with area of intrest in Philosophy of Mathematics, Philosophy of Physical Science, Philosophy of Probability Science, Logic, and Mathematics.
Review
Occurrence of the Slippery Sequence UUUAAAC in the RNA Genome 2 that generates the ORF1ab Protein of SARS-CoV-2
Author(s): Geurdes H*
In the present brief report we look into the slippery sequence TTTAAAC (in cDNA format) of the ORF1ab protein
of SARS-CoV-2. We found a number of TTTAAAC sequences where only one is actively producing a shift-1. There
are three other sequences exactly positioned in the read-through of mRNA as the aforementioned. They do not
produce a-1 frameshift. There is one position where in addition a pseudoknot occurs but no frameshift. We ask if it
is possible to enforce or prevent shifts in TTTAAAC to destroy the ORF1ab derived proteins such as RNA-dependent
RNA polymerase and/or 2’-O-ribose methyltransferase. Finally an mRNA polymer repressor of the one single
effective frameshift is proposed for further research into a medicinal treatment. Perhaps that there are specific protein
repressors... View More»
DOI:
10.35248/2161-0517.20.9.198