Current Synthetic and Systems Biology
Open Access

Nathan J Bowen

Research Interest

Skilled in computational programs implemented in molecular evolution, comparative genomics, microarray analysis, and next generation sequencing transcriptome and genomic alignments and analyses.  I have direct experience with many UNIX, desktop, and WWW based platforms including samtools, bowtie, bowtie2, cufflinks, tophat, IGV, R, Bioconductor, SAM, EDGE, Spotfire DecisionSite for Functional Genomics and DecisionSite for Microarray Analysis, Genesis, Gene Set Enrichment Analysis (GSEA), Genomica, GenePattern, Affymetrix GCOS, Ingenuity Pathways Analysis (IPA), GeneGo, Onto Express, GoSTAT, Bioperl, SEALS, GCG, Parasight, MEME/MAST, Seaview, T-Coffee, ClustalW, PHYLIP, DNASTAR, GeneJockey, DNA Strider, MEGA, DnaSP, K-estimator, etc